Job Description P77399 Confidence 97.77% Date Thu Jan 5 12:28:38 GMT 2012 Rank 283 Aligned Residues 123 % Identity 15% Template d1civa1 SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		306	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.								.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure													.																		.	.	.	.	.	.	.								.	.
Query SS confidence													.																		.	.	.	.	.	.	.								.	.
Query Sequence		A	P	L	N	S	V	G	I	L	G	G	.	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	.	.	.	.	.	P	V	R	I	K	D	I	.	.	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A
Query Conservation													.																		.	.	.	.	.	.	.								.	.
Alig confidence													.													.					.	.	.	.	.	.	.								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	I	N	V	A	V	S	G	A	A	G	M	I	S	N	H	L	L	F	K	L	A	.	S	G	E	V	F	G	P	D	Q	P	I	S	L	K	L	L	G	S	E	R	S	F	A	A	L	E	G	V	A	M	E	L	E	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	P	L	L	R
Template Known Secondary structure											T	T	T	S												.	T	T	T	T	T		T	T											G	G	G													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.															.	100	.	.	.	.
		376	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.															.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Query SS confidence										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Query Sequence		L	I	S	G	T	T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	.	.
Query Conservation										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.											.	.	.
Template Conservation																																																																			.	.
Template Sequence		Q	V	S	I	G	I	D	P	Y	E	I	F	Q	D	A	E	W	A	L	L	I	G	A	K	P	R	G	P	G	M	E	R	A	D	L	L	D	I	N	G	Q	I	F	A	E	Q	G	K	A	L	N	A	V	A	S	P	N	V	K	V	M	V	V	G	N	.	.	P	C	N	T	N	A	L	I	C	L	K	N	A
Template Known Secondary structure							S						T	T	T		S												T	T																									S		T	T							S	S	.	.	S											T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.
					438	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	P	E	Q	V	I	G	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		P	N	I	P	P	K	N	F	H	A	L
Template Known Secondary structure		T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions