Return to main results Retrieve Phyre Job Id

Job DescriptionP77399
Confidence96.92%DateThu Jan 5 12:28:38 GMT 2012
Rank348Aligned Residues45
% Identity16%Templatec3pvcA_
PDB info PDB header:oxidoreductase, transferaseChain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   296...300.........310.........320.........330.........340.
Predicted Secondary structure 



















Query SS confidence 













































Query Sequence  KKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDIN
Query Conservation              
  
 




 

 


   
  

  
 
 
  
Alig confidence 
































.











Template Conservation                














  

. 

  




  
Template Sequence  TAPWYHRPAATRCDDIAIIGGGIVSALTALALQ. RRGAVVTLYCAD
Template Known Secondary structure 

GGG




S

SS

S.TTT

SS
Template Predicted Secondary structure 
















.




Template SS confidence 













































   252.......260.........270.........280.... .....290......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions