Job Description P77399 Confidence 99.26% Date Thu Jan 5 12:28:38 GMT 2012 Rank 156 Aligned Residues 201 % Identity 17% Template c3prjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. Resolution 3.10 Å

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		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.								.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																																	.	.	.	.	.	.	.
Query SS confidence																												.	.																																	.	.	.	.	.	.	.
Query Sequence		P	L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	.	.	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	.	.	.	.	.	.	.	L	K	A	S	E	R	D	K	Q	L	A	L	I
Query Conservation																												.	.																																	.	.	.	.	.	.	.
Alig confidence																								.				.	.																.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	K	K	I	C	C	I	G	A	G	Y	V	G	G	P	T	C	S	V	I	A	.	H	M	C	P	E	I	R	V	T	V	V	D	V	N	E	S	R	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	W	N	S	P	T	L	P	I	Y	E	P	G	L	K	E	V	V	E	S	C	R	G	K	N	L
Template Known Secondary structure												S	T	T										.				T	T	S							S								.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		S	S			T	T									B	T	T	T
Template Predicted Secondary structure																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		378	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.														.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.
Predicted Secondary structure								.														.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query SS confidence								.														.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query Sequence		S	G	T	T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	.	.	.	.	.	.	.	D	I	A	A	H	A
Query Conservation								.														.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Alig confidence								.														.	.	.	.	.	.	.	.	.	.	.	.	.																									.										.	.	.	.	.	.	.
Template Conservation																																																											.
Template Sequence		F	F	S	T	N	I	D	D	A	I	K	E	A	D	L	V	F	I	S	V	N	T	P	T	K	T	Y	G	M	G	K	G	R	A	A	D	L	K	Y	I	E	A	C	A	R	R	I	V	Q	N	S	N	G	Y	K	I	V	.	T	E	K	S	T	V	P	V	R	A	A	E	S	I	R	R	I	F	D	A	N	T
Template Known Secondary structure					S								T		S										B		S	S	S	T	T	T	T	T	S	B		T													T			S					.					S	S			S												S
Template Predicted Secondary structure																																																											.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.								.	460	.	.	.	.	.	.				.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.											490	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.									.	.	.															.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.									.	.	.															.										.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	.	.	.	.	.	.	.	I	I	P	H	A	G	T	S	.	.	.	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	.	G	K	T	P	I	V	V	R	D	.	.	.	.	.	.	.	.	.	.	K	A	G	F	Y	V
Query Conservation																								.	.	.	.	.	.	.									.	.	.															.										.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.									.	.	.															.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	N	L	N	L	Q	V	L	S	N	P	E	F	L	A	E	G	T	A	I	K	D	L	K	N	P	D	R	V	L	I	G	G	D	E	T	P	E	G	Q	R	A	V	Q	A	L	C	A	V	Y	E	H	W	V	P	R	E	K	I	L	T	T	N	T	W	S	S	E	L	S	K	L	A	A	N	A	F	L	A
Template Known Secondary structure			S	S														T	T	S							S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		N	R	I	L	A	P	Y	I	N	E	A	I	R	M	L	T	Q	.	G	E	R	V	E	H	I	D	A	A	L
Query Conservation																			.
Alig confidence		.	.																.
Template Conservation		.	.
Template Sequence		.	.	Q	R	I	S	S	I	N	S	I	S	A	L	C	E	A	T	G	A	D	V	E	E	V	A	T	A	I
Template Known Secondary structure		.	.																	T
Template Predicted Secondary structure		.	.
Template SS confidence
				229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions