Job Description P77399 Confidence 99.72% Date Thu Jan 5 12:28:38 GMT 2012 Rank 92 Aligned Residues 254 % Identity 14% Template c3pefA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+ Resolution 2.07 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A	H
Query Conservation
Alig confidence																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	F	G	F	I	G	L	G	I	M	G	S	A	M	A	K	N	L	V	.	K	A	G	C	S	V	T	I	W	N	R	S	P	E	K	A	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	G	A	E	R	A	A	T	P	E	V	V	E	S
Template Known Secondary structure										S												.		T	T								S	S	G	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T					S
Template Predicted Secondary structure																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.				.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																							.	.																									.	.	.
Query SS confidence																							.	.																									.	.	.
Query Sequence		R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	.	.	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	.	.	.	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	I	I	P	H	A
Query Conservation																							.	.																									.	.	.
Alig confidence																							.	.																									.	.	.
Template Conservation
Template Sequence		C	P	V	T	F	A	M	L	A	D	P	A	A	A	E	E	V	C	F	G	K	H	G	V	L	E	G	I	G	E	G	R	G	Y	V	D	M	S	T	V	D	P	A	T	S	Q	R	I	G	V	A	V	V	A	K	G	G	R	F	L	E	A	P	V	S	G	S	K	K	P	A	E	D	G	T	L	I	I	L	A
Template Known Secondary structure			S							S	S										S	T	T								T	T							S																	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.								.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																										.												.	.	.	.	.	.	.															.												.
Query SS confidence																										.												.	.	.	.	.	.	.															.												.
Query Sequence		G	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	.	R	D	K	A	G	F	Y	V	N	R	I	.	.	.	.	.	.	.	L	A	P	Y	I	N	E	A	I	R	M	L	T	Q	.	G	E	R	V	E	H	I	D	A	A	L	.	V	K	F	G	F	P	V	G	P	I
Query Conservation																										.												.	.	.	.	.	.	.															.												.
Alig confidence																										.												.	.	.	.	.	.	.															.												.
Template Conservation
Template Sequence		A	G	D	R	N	L	Y	D	E	A	M	P	G	F	E	K	M	G	K	K	I	I	H	L	G	D	V	G	K	G	A	E	M	K	L	V	V	N	M	V	M	G	G	M	M	A	C	F	C	E	G	L	A	L	G	E	K	A	G	L	A	T	D	A	I	L	D	V	I	G	A	G	A	M	A	N	P	M	F	A
Template Known Secondary structure																										S	S	T	T																														T	T													S	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		534	.	.	.	.	.										540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	D	E	V	.	.	.	.	.	.	.	.	.	G	I	D	T	G	T	K	I	I	P	V	L	E	A	A	Y	G	E	R	F	S	A	P	A	N	V	V	S	S	I	L	N	D	D	R	K	G	R	K	N	G	R	G	F	Y	L	Y	G	Q
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.													.
Template Conservation																													.
Template Sequence		L	K	G	G	L	I	R	D	R	N	F	A	P	A	F	P	L	K	H	M	Q	K	D	L	R	L	A	.	V	A	L	G	D	R	V	G	Q	P	L	V	A	S	A	A	A	N	E	L	F	K	G	A	R	A	A	G	F	G	D	E	D	F	S	A
Template Known Secondary structure									T	T					S	S	B												.								T																			T	T		T	T	S	B	G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions