Job Description P77399 Confidence 98.80% Date Thu Jan 5 12:28:38 GMT 2012 Rank 199 Aligned Residues 141 % Identity 18% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	A	E	F	A	S	Q	V	R	A	I	I	K	Q	L	R	E	N	K	E	L	R	G	V	V	F	V	S	A	K	P	D	N	F	I	A	G	A	D	I	N	M	I	G	N	C	K	T	A	Q	E	A	E	A	L	A	R	Q	G	Q	Q	L	M	A	E	I	H	A	L	P	I	Q	V	I	A	A	I	H
Query Conservation
Alig confidence																															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	Y	.	.	.	.	.	I	N	S	P	G	G	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	M	A	I	Y	D	T	M	Q	F	I	K	P	K	V	S	T	I	C	I
Template Known Secondary structure			B																				S	S	S						.	.	.	.	.						B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S
Template Predicted Secondary structure																															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.																	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																		.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	C	L	G	G	G	L	E	L	A	L	A	C	H	.	.	G	R	V	C	T	D	D	P	K	T	V	L	G	L	P	E	V	Q	L	G	L	L	P	G	S	G	G	T	Q	R	L	P	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	S	T	A	L	E	M	I	L	T
Query Conservation																	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		G	M	A	A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	.	.	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E	R	D	T	D	R
Template Known Secondary structure						T									S		T	T						T	T			.	.												S	S																																					T	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Q	L	R	A	K	Q	A	L	K	L	G	L	V	D	D	V	V	P	H	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure														T	S		S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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