Job Description P77399 Confidence 99.29% Date Thu Jan 5 12:28:38 GMT 2012 Rank 150 Aligned Residues 156 % Identity 17% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	.	G	F	A
Query Conservation																																																																														.
Alig confidence																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	.	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A
Template Known Secondary structure		S								S												.		T	T								S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S
Template Predicted Secondary structure																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.												.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	.	.	.	.	.	.	.	.	.	.	.	K	M	P	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		E	D	A	L	I	V	L	A	V	P	.	.	X	T	A	I	D	S	L	L	D	A	V	H	T	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	S	A	S	X	D	G	L	F	K	R	A	V
Template Known Secondary structure		T	T							S		.	.																T	T								S		S										T	T		G	G	G	B						T	T						G	G	G			S	S	S	S	T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.									.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.
Query Sequence		V	E	I	I	P	H	A	G	T	S	A	.	.	.	.	.	.	.	.	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V
Query Conservation													.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S
Template Known Secondary structure							G	G	G	T	S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions