Job Description P77399 Confidence 97.16% Date Thu Jan 5 12:28:38 GMT 2012 Rank 327 Aligned Residues 168 % Identity 18% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	F	F	A	S	T	D	V	K	K	D	P	G	S	D	A	P	P	A	P	L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L
Query Conservation
Alig confidence																																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	D	Y	Q	A	L	K	N	Q	A	L	W	K	P	L	P	E	Y	T	R	E	E	F	S	V	G	I	X	G	A	G	V	L	G	A	K	V	A	E	S	L	Q	A	.	W	G	F	P	L	R	C	W	S	R	S	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T										S	T	T									S												T	.	T	T								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.
Predicted Secondary structure																				.																																							.	.																	.
Query SS confidence																				.																																							.	.																	.
Query Sequence		K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	.	.	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	R	P	E	Q
Query Conservation																				.																																							.	.																	.
Alig confidence		.	.	.	.															.																																							.	.																	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q	T	R	V	L	I	N	L	L	P	N	T	A	Q	T	V	G	I	I	N	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A	R	G	V	H	V	Q	E	A	D	L	L	A	A	L	D	S	G	K	L	K
Template Known Secondary structure		.	.	.	.			T	T						S	T	T	T							T		S										T	T	T	T	T		B	S						T	S		T	T							S		G	G	G	B												T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		442	.	.	.	.	.	.	.	450									.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		V	I	G	L	H	F	F	S	P	.	.	.	.	.	.	.	.	V	E	K	M	P	L	V	E	I	I	P	H	A	G	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	X	L	D	V	F	S	Q	E	P	L	P	Q	E	S	P	L	W	R	H	P	R	V	A	X	T	P	H	I	A	A	V	T	R	P	A	E	A	I	D	Y	I	S	R	T	I
Template Known Secondary structure						S			S	S	S	S			T	T		T	T	T	T		T	T					S	S		S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions