Job Description P77399 Confidence 100.00% Date Thu Jan 5 12:28:38 GMT 2012 Rank 68 Aligned Residues 222 % Identity 22% Template c3h02F_ PDB info PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. Resolution 2.15 Å

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		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		M	E	M	T	.	S	A	F	T	L	N	V	R	L	D	N	I	A	V	I	T	I	D	V	P	G	E	K	M	N	T	L	K	A	E	F	A	S	Q	V	R	A	I	I	K	Q	L	R	E	N	K	E	L	R	G	V	V	F	V	S	A	K	P	D	N	F	I	A	G	A	D	I	N	M	I	G	N	C	K	T
Query Conservation						.
Alig confidence						.																								.																																															.	.	.	.	.
Template Conservation																														.																																															.	.	.	.	.
Template Sequence		C	S	E	G	Y	T	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	.	N	A	F	R	P	L	T	V	K	E	X	I	Q	A	L	A	D	A	R	Y	D	D	N	V	G	V	I	I	L	T	G	E	G	D	K	A	F	C	A	G	G	D	H	L	N	V	.	.	.	.	.
Template Known Secondary structure				T	T		S	S							T	T	S									G	G	G	T	.	T		B																			T	T									S	S	S	S						B				T		.	.	.	.	.
Template Predicted Secondary structure																														.																																															.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	A	E	A	L	A	R	Q	G	Q	Q	L	M	A	E	I	H	A	L	P	I	Q	V	I	A	A	I	H	G	A	C	L	G	G	G	L	E	L	A	L	A	C	H	G	R	V	C	T	D	D	P	K	T	V	L	G	L	P	E	V	Q	L	G	L	L	P	G	S	G	G	T	Q	R	L	P	R	L	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	X	V	A	G	Y	S	I	G	G	G	H	V	L	H	X	X	C	D	L	T	I	A	A	E	N	A	I	.	.	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	X	A	R	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											S	S								S				T									S	S						T	T			.	.									T					S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template SS confidence
													109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	S	T	A	L	E	M	I	L	T	G	K	Q	L	R	A	K	Q	A	L	K	L	G	L	V	D	D	V	V	P	H	S	I	L	L	E	A	A	V	E	L	A	K	K	E	R	P	S	S	R	P	L	P	V	R	E	R	I	L	A	G	P	L	G	R	A	L	L	F	K	M	V	G	K	K	T	E	H	K
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D	A	Q	Q	A	L	D	X	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	X	L	Q	N	S	P	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																								T	T	S	S	S					G	G	G														T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	G	N	Y	P	A	T	E	R	I	L	E	V	V	E	T	G	L	A	Q	G	T	S	S	G	Y	D	A	E	A	R	A	F	G	E	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	A	L	R	C	L	K	A	A	L	N	A	D	C	.	.	D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	X	L	F
Template Known Secondary structure		.	.	.	.	.	.												T	T	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.														.	.
Template SS confidence
								228	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions