Job Description P77399 Confidence 98.62% Date Thu Jan 5 12:28:38 GMT 2012 Rank 220 Aligned Residues 122 % Identity 22% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	A	P	P	A	P	L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G
Query Conservation																																		.	.
Alig confidence																															.			.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	K	S	T	V	N	K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	.	G	I	A	D	R	L	V	L	L	D	L	S	E	G	T	K	G	A	T	M	D	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	N	L	P	N	V	E	I
Template Known Secondary structure																	S														.	T			S								S		G	G	G		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T		T	T
Template Predicted Secondary structure																															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																			.	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.										.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.						.	.	440	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		T	T	D	Y	R	G	F	A	H	R	D	L	I	I	E	A	V	.	.	.	.	.	.	.	.	.	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	.	.	.	.	R	P	E	Q	V	I	G	L
Query Conservation																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																											.	.	.													.	.	.	.	.
Template Conservation																																																						.	.	.
Template Sequence		S	K	D	L	S	A	S	A	H	S	K	V	V	I	F	T	V	N	S	Q	S	Y	L	D	V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	.	.	.	S	Q	P	V	E	I	M	T	Y	V	T	W	K	L	S	T	F	P	A	N	R	V	I	G	I
Template Known Secondary structure			S		G	G	G	G	T	T		S																								T	T								S	T	T							.	.	.	S	S	S													T			G	G	G
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions