Job Description P77399 Confidence 99.81% Date Thu Jan 5 12:28:38 GMT 2012 Rank 90 Aligned Residues 214 % Identity 13% Template c3d1lB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122; PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis Resolution 2.19 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	.	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A
Query Conservation																														.
Alig confidence																						.								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	I	V	L	I	G	A	G	N	L	A	T	N	L	A	K	A	L	Y	.	R	K	G	F	R	I	V	Q	V	Y	S	R	T	E	E	S	A	R	E	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	E	A	E	Y	T	T	D	L	A	E	V	N	P
Template Known Secondary structure										S												.		T	T									S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					S		G	G	G	S		S
Template Predicted Secondary structure																						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	.	I	I	P	H	A	G	T	S
Query Conservation																																																																									.
Alig confidence													.	.																																																											.
Template Conservation													.	.
Template Sequence		Y	A	K	L	Y	I	V	S	L	K	D	.	.	S	A	F	A	E	L	L	Q	G	I	V	E	G	K	R	E	E	A	L	X	V	H	T	A	G	S	I	P	X	N	V	W	E	G	H	V	P	H	Y	G	V	F	Y	P	X	Q	T	F	S	K	Q	R	E	V	D	F	K	E	I	P	F	F	I	E	A	S	S
Template Known Secondary structure				S									.	.												T	T			T	T								S	S	S		G	G	G	G	T	T	T		S	S								S			B	T	T	B				G	G	G								S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.									490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.								.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.				.	.
Query SS confidence																									.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.				.	.
Query Sequence		A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	D	.	.	.	.	.	.	.	.	K	A	G	F	Y	V	N	R	I	L	A	P	Y	I	N	E	A	I	R	M	L	T	Q	G	E	R	V	E	H	I	D	A	A	L	V	K	F	.	.	.	.	.	.	.	G	F	P	.	.
Query Conservation																									.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.				.	.
Alig confidence																									.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.				.	.
Template Conservation
Template Sequence		T	E	D	A	A	F	L	K	A	I	A	S	T	L	S	N	R	V	Y	D	A	D	S	E	Q	R	K	S	L	H	L	A	A	V	F	T	C	N	F	T	N	H	X	Y	A	L	A	A	E	L	L	K	K	Y	N	L	P	F	D	V	X	L	P	L	I	D	E	T	A	R	K	V	H	E	L	E	P	K	T	A
Template Known Secondary structure														T	T		S																																						T	T			G	G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
			530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	G	P	I	Q	L	L	D	E	V	G	I	D	T	G	T	K	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Q	T	G	P	A	I	R	Y	D	E	N	V	I	G	N	H	L	R	X
Template Known Secondary structure				S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions