Job Description P77399 Confidence 98.88% Date Thu Jan 5 12:28:38 GMT 2012 Rank 191 Aligned Residues 122 % Identity 16% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F
Query Conservation																											.	.
Alig confidence																							.				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	V	T	V	V	G	V	G	M	V	G	M	A	S	A	I	S	I	L	L	.	K	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	F	L	K	T	K	I	V	G	D	K	D	Y	S	V	T
Template Known Secondary structure		S								S													.	T	T			S							S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G			S						S	S	G	G	G	G
Template Predicted Secondary structure																							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		387	.	.	390	.	.	.											.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																													.																			.
Query SS confidence									.	.	.	.	.	.	.	.	.	.																													.																			.
Query Sequence		A	H	R	D	L	I	I	.	.	.	.	.	.	.	.	.	.	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	.	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	.	E	Q	V	I	G	L
Query Conservation									.	.	.	.	.	.	.	.	.	.																													.																			.
Alig confidence									.	.	.	.	.	.	.	.	.	.																													.																			.
Template Conservation
Template Sequence		A	N	S	K	V	V	V	V	T	A	G	A	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S	N	P	V	D	I	L	T	Y	V	A	W	K	L	S	G	F	P	R	H	R	V	I	G	S
Template Known Secondary structure		T	T		S																																			T	T							S	S	S											T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions