Job Description P77399 Confidence 97.83% Date Thu Jan 5 12:28:38 GMT 2012 Rank 280 Aligned Residues 118 % Identity 24% Template c2pwzG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase Resolution 2.20 Å

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		310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure								.																	.	.
Query SS confidence								.																	.	.
Query Sequence		S	V	G	I	L	G	.	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	.	.	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F
Query Conservation								.																	.	.
Alig confidence								.																	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	H	I	P	T	A	V	K	I	K	G	F	S	G	E	D	A	T	P	A	L
Template Known Secondary structure							T	T	T	S														S		T	T								S	S	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S		S	S								S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.															.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.										.	.	.	440	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.	.	.	.	.	.	.	.
Query Sequence		A	H	R	D	L	I	I	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	.	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	.	.	.	.	.	.	.	.	.	T	R	P	E	Q	V
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.							.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		E	G	A	D	V	V	L	I	S	A	G	V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	I	T	N	.	.	.	.	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L
Template Known Secondary structure		T	T		S												S	S																										T	T	S						S	S	.	.	.	.																	T				T	T	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		443	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		144	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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