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Job DescriptionP77399
Confidence99.56%DateThu Jan 5 12:28:38 GMT 2012
Rank114Aligned Residues221
% Identity11%Templatec2i76B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   311........320.........330.........340.........350.........360.........370.........380.........390
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Query Sequence  VGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRD
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Template Sequence  LNFVGTGTLTRFFLECLK. IGY. . . . ILSRSIDRARNLAE. . . . . . . . . . . . . . . . . . . . . . . . . . VYGGKAATLEKHPE
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   3......10.........20 ... ......30....... ..40.........50.
 
   391........400.........410.........420.........430.........440.........450.........460.........470
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Query Sequence  LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTI
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Template Sequence  VVFVIVPDR. . . . . YIKTVANHLNLGDAVLVHCSGFLSSEIFKKS. . GRASIHPNFSFLEKALEXKDQIVFGLEGDERGL
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   5960....... ..70.........80.........90........ .100.........110.........120.........130.
 
   471........480.........490.. .......500.........510........ .520......... 530.
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Query Sequence  ATTVKLAKKQGKTPIVVRDKAG. . . . . . FYVNRILAPYINEAIRMLTQGERVEH. . . . . . . . . . IDAALVKFGFP. . . VG
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Template Sequence  PIVKKIAEEISGKYFVIEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELLIHTLXKGVADNI. KKXRVECSLTG
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   134.....140.........150.........160.........170.........180.........190.........200. ........210..
 
   532.......540.........550.........560.........570.
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Query Sequence  PIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSSILN
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Template Sequence  PVKRGDWQVVEEERREYEKIFGNT. VLYDEIVKLLREVAE
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   215....220.........230........ .240.........250...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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