Return to main results Retrieve Phyre Job Id

Job DescriptionP77399
Confidence96.70%DateThu Jan 5 12:28:38 GMT 2012
Rank363Aligned Residues65
% Identity14%Templatec2hk8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380.... ...
Predicted Secondary structure 


















.
Query SS confidence 











































































.


Query Sequence  NSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYR. GFA
Query Conservation    
 




 

 


   
  

  
 
 
     
      
   
                    
    
  . 
 
Alig confidence 



















.






















.......................








.


Template Conservation 
 












   
 .  
  
 
 


  

  

   .......................           
 
Template Sequence  KSILVLGAGGASRAVIYALV. KEGAKVFLWNRTKEKAIKLAQKF. . . . . . . . . . . . . . . . . . . . . . . PLEVVNSPEEVID
Template Known Secondary structure 


S.TT

SSS.......................


S
GGGTGG
Template Predicted Secondary structure 



.





.......................







Template SS confidence 















































































   124.....130.........140... ......150.........160...... ...170.........
 
   388.390.......
Predicted Secondary structure 





Query SS confidence 









Query Sequence  HRDLIIEAVF
Query Conservation   







 
Alig confidence 









Template Conservation    







Template Sequence  KVQVIVNTTS
Template Known Secondary structure  G
S
SS
Template Predicted Secondary structure 






Template SS confidence 









   180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions