Job Description P77399 Confidence 99.53% Date Thu Jan 5 12:28:38 GMT 2012 Rank 122 Aligned Residues 252 % Identity 17% Template c2gf2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of human hydroxyisobutyrate dehydrogenase Resolution 2.38 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	.	R	G	F	A	H
Query Conservation																																																																												.
Alig confidence																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	G	F	I	G	L	G	N	M	G	N	P	M	A	K	N	L	M	.	K	H	G	Y	P	L	I	I	Y	D	V	F	P	D	A	C	K	E	F	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	Q	V	V	S	S	P	A	D	V	A	E	K
Template Known Secondary structure									S	T	T										.		T	T								S	S	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S	S
Template Predicted Secondary structure																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																									.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure														.	.																																										.	.	.
Query SS confidence														.	.																																										.	.	.
Query Sequence		R	D	L	I	I	E	A	V	F	E	N	L	.	.	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	.	.	.	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	I	I	P	H	A
Query Conservation														.	.																																										.	.	.
Alig confidence														.	.																																										.	.	.
Template Conservation
Template Sequence		A	D	R	I	I	T	M	L	P	T	S	I	N	A	I	E	A	Y	S	G	A	N	G	I	L	K	K	V	K	K	G	S	L	L	I	D	S	S	T	I	D	P	A	V	S	K	E	L	A	K	E	V	E	K	M	G	A	V	F	M	D	A	P	V	S	G	G	V	G	A	A	R	S	G	N	L	T	F	M	V
Template Known Secondary structure			S							S	S										S	T	T		G	G	G	T			T	T							S																	T	T										S								T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.						.	.	.	.	.	.	.	500	.				.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.
Predicted Secondary structure																															.	.	.	.	.										.	.	.												.															.
Query SS confidence																															.	.	.	.	.										.	.	.												.															.
Query Sequence		G	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	D	K	A	G	.	.	.	.	.	F	Y	V	N	R	I	L	A	P	.	.	.	Y	I	N	E	A	I	R	M	L	T	Q	.	G	E	R	V	E	H	I	D	A	A	L	V	K	F	.	G	F	P	V	G	P	I
Query Conservation																															.	.	.	.	.										.	.	.												.															.
Alig confidence																															.	.	.	.	.										.	.	.												.															.
Template Conservation
Template Sequence		G	G	V	E	D	E	F	A	A	A	Q	E	L	L	G	C	M	G	S	N	V	V	Y	C	G	A	V	G	T	G	Q	A	A	K	I	C	N	N	M	L	L	A	I	S	M	I	G	T	A	E	A	M	N	L	G	I	R	L	G	L	D	P	K	L	L	A	K	I	L	N	M	S	S	G	R	C	W	S	S	D
Template Known Secondary structure			S		G	G	G									T	T	T									S	T	T																														T	T													S	T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		534	.	.	.	.	.	540																	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	D	E	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	G	T	K	I	I	P	V	L	E	A	A	Y	G	E	R	F	S	A	P	A	N	V	V	S	S	I	L	N	D	D	R	K	G	R	K	N	G	R	G	F	Y	L	Y	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																						.
Template Sequence		T	Y	N	P	V	P	G	V	M	D	G	V	P	S	A	N	N	Y	Q	G	G	F	G	T	T	L	M	A	K	D	L	G	L	A	Q	D	.	S	A	T	S	T	K	S	P	I	L	L	G	S	L	A	H	Q	I	Y	R	M	M	C	A	K	G	Y	S	K	K	D	F	S
Template Known Secondary structure		T	S		S	S	T	T	T	S	S	S	S	G	G	G	G	T	T		S	S	S	B														.					T	T																		T	T	T		T	T	S	B	G	G
Template Predicted Secondary structure																																						.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions