Job Description P77399 Confidence 99.68% Date Thu Jan 5 12:28:38 GMT 2012 Rank 96 Aligned Residues 180 % Identity 16% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F
Query Conservation																											.	.
Alig confidence																						.					.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	V	L	I	V	G	V	G	F	X	G	G	S	F	A	K	S	L	R	.	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	V	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D
Template Known Secondary structure								S		S												.		T	T			S							S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S				S		G	G	G	G	G	G
Template Predicted Secondary structure																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		F	S	P	D	F	V	X	L	S	S	P	V	R	.	.	T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G	K	R	F	V	G	G	H	P	I	A	G	T	E	K	S	G	V	E	Y	S	L	D	N	L	Y	E	G
Template Known Secondary structure		G			S						S		G	G	.	.	G												S		T	T								S			T											G	G	G											S			S	G	G	G			S	S	T	T	T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
				457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure		.	.																																	.
Query SS confidence		.	.																																	.
Query Sequence		.	.	V	E	I	I	P	H	A	G	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	.	D	K	A	G	F	Y	V	N	R	I	L	A	P	Y	I	N	E	A	I	R	M	L	T
Query Conservation		.	.																																	.
Alig confidence		.	.																																	.
Template Conservation
Template Sequence		K	K	V	I	L	T	P	T	K	K	T	D	K	K	R	L	K	L	V	K	R	V	W	E	D	V	G	G	V	V	E	Y	X	S	P	E	L	H	D	Y	V	F	G	V	V	S	H	L	P	H	A	V	A	F	A	L	V	D
Template Known Secondary structure										T	T	S															T	T																			T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions