Job Description P77399 Confidence 98.86% Date Thu Jan 5 12:28:38 GMT 2012 Rank 194 Aligned Residues 122 % Identity 16% Template c2d4aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of the malate dehydrogenase from aeropyrum pernix Resolution 2.87 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A	H	R
Query Conservation																									.
Alig confidence																						.			.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	I	L	G	A	G	K	V	G	M	A	T	A	V	M	L	M	M	R	.	G	Y	D	D	L	L	L	I	A	R	T	P	G	K	P	Q	G	E	A	L	D	L	A	H	A	A	A	E	L	G	V	D	I	R	.	.	.	.	.	.	.	.	.	.	.	.	I	S	G	S	N	S	Y	E	D	M	R	G	S
Template Known Secondary structure								S														.	T		S							S	S	T	T																	T					.	.	.	.	.	.	.	.	.	.	.	.					S		G	G	G	G	T	T
Template Predicted Secondary structure																						.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																										.																	.
Query SS confidence									.	.	.	.	.	.																										.																	.
Query Sequence		D	L	I	I	E	A	V	.	.	.	.	.	.	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	.	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	R	P	E	Q	V	I	G	L
Query Conservation									.	.	.	.	.	.																										.																	.
Alig confidence									.	.	.	.	.	.																										.																	.
Template Conservation
Template Sequence		D	I	V	L	V	T	A	G	I	G	R	K	L	E	A	N	A	N	T	M	A	D	L	A	E	K	I	K	A	Y	A	K	D	A	I	V	V	I	T	T	N	P	V	D	A	M	T	Y	V	M	Y	K	K	T	G	F	P	R	E	R	V	I	G	F
Template Known Secondary structure		S													T	T																	T	T	S							S	S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions