Job Description P77399 Confidence 99.21% Date Thu Jan 5 12:28:38 GMT 2012 Rank 159 Aligned Residues 199 % Identity 13% Template c2cvzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: structure of hydroxyisobutyrate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A	H
Query Conservation
Alig confidence																						.					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	V	A	F	I	G	L	G	A	X	G	Y	P	X	A	G	H	L	A	.	R	R	F	P	.	T	L	V	W	N	R	T	F	E	K	A	L	R	H	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	G	S	E	A	V	P	L	E	R	V	A	E
Template Known Secondary structure										S	T	T										.			S		.						S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G	G	G	G
Template Predicted Secondary structure																						.					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																									.	.	.	.	.	.	.	.	50	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																																										.													.
Query SS confidence																																										.													.
Query Sequence		R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	.	I	G	D	I	A	A	H	A	T	R	P	E	.	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	I	I	P	H	A	G	T	S
Query Conservation																																										.													.
Alig confidence																																										.													.
Template Conservation
Template Sequence		A	R	V	I	F	T	C	L	P	T	T	R	E	V	Y	E	V	A	E	A	L	Y	P	Y	L	R	E	G	T	Y	W	V	D	A	T	S	G	E	P	E	A	S	R	R	L	A	E	R	L	R	E	K	G	V	T	Y	L	D	A	P	V	S	G	G	T	S	G	A	E	A	G	T	L	T	V	X	L	G	G	P
Template Known Secondary structure		S	S							S	S												T	T	T			T	T							S																T	T	T										S								T								S
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.						.	.	.	.	.	.				.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.							.	.	.														.
Query SS confidence																												.	.	.	.	.							.	.	.														.
Query Sequence		A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	D	K	A	G	.	.	.	.	.	F	Y	V	N	R	I	.	.	.	L	A	P	Y	I	N	E	A	I	R	M	L	T	.	Q	G	E	R	V	E	H	I	D	A	A	L	V	K	F	G	F	P	V	G	P	I	Q
Query Conservation																												.	.	.	.	.							.	.	.														.
Alig confidence													.															.	.	.	.	.							.	.	.														.
Template Conservation													.
Template Sequence		E	E	A	V	E	R	V	R	P	F	L	.	A	Y	A	K	K	V	V	H	V	G	P	V	G	A	G	H	A	V	K	A	I	N	N	A	L	L	A	V	N	L	W	A	A	G	E	G	L	L	A	L	V	K	Q	G	V	S	A	E	K	A	L	E	V	I	N	A	S	S	G	R	S	N	A	T	E
Template Known Secondary structure									G	G	G		.	T	T									S	T	T																														T	T											T	T	S	T	T
Template Predicted Secondary structure													.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions