Return to main results Retrieve Phyre Job Id

Job DescriptionP77399
Confidence98.77%DateThu Jan 5 12:28:38 GMT 2012
Rank204Aligned Residues101
% Identity16%Templatec1z82A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.........330.........340.........350.........360.........370.........380.........
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  SVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHR
Query Conservation   
 




 

 


   
  

  
 
 
     
      
   
                    
    
   
  
Alig confidence 


















.

















............







.




















Template Conservation 

 




 

   
  
 .  
  
    
       ............    
   .        
            
Template Sequence  RFFVLGAGSWGTVFAQXLH. ENGEEVILWARRKEIVDL. . . . . . . . . . . . INVSHTSP. YVEESKITVRATNDLEEIKKE
Template Known Secondary structure 

S.TT

SS............S
BT.TBTT



SS
GGG

TT
Template Predicted Secondary structure 


.




............




.













Template SS confidence 















































































   4.....10.........20.. .......30.........40 ........ .50.........60.........
 
   390.........400.........410.........420.........
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  DLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPI
Query Conservation 






 
 
  
  
   
       







 
 
Alig confidence 







.....


























Template Conservation 
 


 

.....          
      
  
 

   
Template Sequence  DILVIAIP. . . . . VQYIREHLLRLPVKPSXVLNLSKGIEI
Template Known Secondary structure 
S
.....GGGTT
SS

S





T
Template Predicted Secondary structure 


.....











Template SS confidence 







































   70....... ..80.........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions