Job Description P77399 Confidence 98.68% Date Thu Jan 5 12:28:38 GMT 2012 Rank 215 Aligned Residues 219 % Identity 15% Template c1yj8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: initial structural analysis of plasmodium falciparum glycerol-3-2 phosphate dehydrogenase Resolution 2.85 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.										.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	.	.	.	.	.	.	.	.	.	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																					.							.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	S	I	L	G	S	G	N	W	A	S	A	I	S	K	V	V	G	.	T	N	A	K	N	N	Y	L	F	E	N	E	V	R	M	W	I	R	D	E	F	E	R	M	V	D	I	I	N	N	K	.	.	.	.	.	.	.	.	.	.	H	E	N	T	K	Y	L	K	G	V	P	L	P	H	N	I	V	A	H
Template Known Secondary structure									S												.							T	T	B		S								S													.	.	.	.	.	.	.	.	.	.		B		T	T	T	S	T	T		B			T	T
Template Predicted Secondary structure																					.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.											.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		381	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure					.																															.																											.	.
Query SS confidence					.																															.																											.	.
Query Sequence		T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	.	C	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	.	.	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L
Query Conservation					.																															.																											.	.
Alig confidence					.															.	.															.																											.	.
Template Conservation																				.	.
Template Sequence		S	D	L	A	S	V	I	N	D	A	D	L	L	I	F	I	V	P	.	.	C	Q	Y	L	E	S	V	L	A	S	I	K	E	I	K	I	A	S	H	A	K	A	I	S	L	T	K	G	F	I	V	K	K	N	Q	M	K	L	C	S	N	Y	I	S	D	F	L	N	I	P	C	S	A	L	S	G	A	N	I	A
Template Known Secondary structure		S	S	S					T	T		S								.	.												T						T	T									S					T	T													S	S	S								S
Template Predicted Secondary structure																				.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		457	.	.	460	.	.	.	.	.								.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.												.	.
Predicted Secondary structure											.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	I	I	P	H	A	G	T	.	.	.	.	.	.	.	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	D	K	A	G	F	Y	V	N	R	I	L	A	P	Y	I	N	E	A	I	R	M	L	T	Q	G	.	E	R	.	.	.	.	.	.	.	.	.	.	.	V	E
Query Conservation											.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	D	V	A	M	E	N	F	S	E	A	T	I	G	G	N	D	K	D	S	L	V	I	W	Q	R	V	F	D	L	P	Y	F	K	I	N	C	V	N	E	T	I	E	V	E	I	C	G	A	L	K	N	I	I	T	L	A	C	G	F	C	D	G	L	N	L	P	T	N	S	K	S	A	I	I	R	N	G	I	N
Template Known Secondary structure						T	T										S														B	T	T							S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	D	A	A	L	V	K	F	G	F	P	V	G	P	I	Q	L	L	D	E	V	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	I	L	F	G	K	V	F	F	Q	K	F	N	E	N	I	L	L	E	S	C	G	F
Template Known Secondary structure											S	S				G	G	G	G	G	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions