Job Description P77399 Confidence 98.10% Date Thu Jan 5 12:28:38 GMT 2012 Rank 260 Aligned Residues 174 % Identity 14% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	R	L	D	N	I	A	V	I	T	I	D	V	P	G	E	K	M	N	T	L	K	A	E	F	A	S	Q	V	R	A	I	I	K	Q	L	R	E	N	K	E	L	R	G	V	V	F	V	S	A	K	P	D	N	F	I	A	G	A	D	I	N	M	I	G	N	C	K	T	A	Q	E	A	E	A	L	A	R	Q
Query Conservation
Alig confidence																				.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	D	G	R	T	V	F	A	Y	A	Q	D	F	T	V	L	G	.	G	S	L	G	E	T	H	A	N	K	I	V	R	A	Y	E	L	A	L	K	V	G	A	P	V	V	G	I	N	D	S	G	G	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	L	S	L	E	G
Template Known Secondary structure				T	T										T	T	T	G	G	.	G		B																			T											S	B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																				.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																	.	.	.	.	.	.	.	.	150
		90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	Q	Q	L	M	A	E	I	H	A	L	P	.	.	I	Q	V	I	A	A	I	H	G	A	C	L	G	G	G	L	E	L	A	L	A	C	H	G	R	V	C	T	D	D	P	K	T	V	L	G	L	P	E	V	Q	L	G	L	L	P	G	S	G	G	T	Q	R	L	P	R	L	I	G	V	S	T	A	L	E	M
Query Conservation														.	.
Alig confidence														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	A	V	F	K	M	N	V	M	A	S	G	V	I	P	Q	I	T	I	M	A	G	P	A	A	G	G	A	V	Y	S	P	A	L	T	D	F	I	I	M	I	K	G	D	A	Y	Y	M	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	P	E	I	T	K	V	V
Template Known Secondary structure													T	T	T	S								S				G	G	G	G						S	S							S	T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																					.	.	.	.	.	.	.	.	210
		168	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure													.	.	.	.	.	.	.												.
Query SS confidence													.	.	.	.	.	.	.												.
Query Sequence		I	L	T	G	K	Q	L	R	A	K	Q	.	.	.	.	.	.	.	A	L	K	L	G	L	V	D	D	V	V	.	P	H	S	I	L	L	E	A	A	V	E	L	A	K	K	E	R	P	S	S	R	P	L	P	V	R	E	R	I	L	A	G	P
Query Conservation													.	.	.	.	.	.	.												.
Alig confidence		.	.										.	.	.	.	.	.	.												.
Template Conservation		.	.
Template Sequence		.	.	L	G	E	E	V	S	F	Q	D	L	G	G	A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	Q	E	A	I	N	L	T	K	R	L	L	S	Y	L	P	S	N	N	M	E	E	P	P	Y	I	D	T	G	D	P	A
Template Known Secondary structure		.	.	S	S										B							T	T				S				S	S															S		S	S	T	T	S						S
Template Predicted Secondary structure		.	.
Template SS confidence
				211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions