Job Description P77399 Confidence 97.90% Date Thu Jan 5 12:28:38 GMT 2012 Rank 275 Aligned Residues 117 % Identity 17% Template c1wziA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus Resolution 2.00 Å

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		310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																		.	.	.	.	.	.	.	.	.
Query SS confidence									.																		.	.	.	.	.	.	.	.	.
Query Sequence		S	V	G	I	L	G	G	.	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	.	.	.	.	.	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G
Query Conservation									.																		.	.	.	.	.	.	.	.	.
Alig confidence									.														.				.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	A	V	T	G	A	A	G	Q	I	G	Y	S	L	L	F	R	I	A	A	.	G	E	M	L	G	K	D	Q	P	V	I	L	Q	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	V	M	E	L	E	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	L	L	A	G	L	E	A
Template Known Secondary structure						S	S	T	T	S												T	.	T	T	T	T		T	T											T	T	T													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																							.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60	.	.	.	.	.	.	.	.	.
		380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.															.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.						.
Predicted Secondary structure						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																			.	.	.	.	.
Query SS confidence						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																			.	.	.	.	.
Query Sequence		T	T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	.	.	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	.	.	.	.	.	T
Query Conservation						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																			.	.	.	.	.
Alig confidence						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.						.	.	.	.										.	.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		T	D	D	P	K	V	A	F	K	D	A	D	Y	A	L	L	V	G	A	A	P	R	K	A	G	M	E	R	R	D	L	L	Q	V	N	G	K	I	F	T	E	Q	G	R	A	L	A	E	V	A	K	K	D	V	K	V	L	V	V	G	N	.	.	.	.	P	A	N	T	N	A	L	I	A	Y	K	N	A	P	G
Template Known Secondary structure			S						T	T	T		S												S	S																									S		T	T							S	S	.	.	.	.	S											T		T	T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		438	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	E	Q	V	I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	P	R	N	F	T	A
Template Known Secondary structure		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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