Job Description P77399 Confidence 97.53% Date Thu Jan 5 12:28:38 GMT 2012 Rank 303 Aligned Residues 118 % Identity 19% Template c1smkD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase, glyoxysomal; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures Resolution 2.50 Å

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		310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure								.																				.
Query SS confidence								.																				.
Query Sequence		S	V	G	I	L	G	.	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	.	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A
Query Conservation								.																				.
Alig confidence								.																				.									.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		K	V	A	I	L	G	A	A	G	G	I	G	Q	P	L	A	M	L	M	K	M	N	P	L	V	S	V	L	H	L	Y	D	V	V	N	.	.	.	.	.	.	.	.	.	.	A	P	G	V	T	A	D	I	S	H	M	D	T	G	A	V	V	R	G	.	.	.	.	F	L	G	Q	Q	Q	L	E	A	A	L	T
Template Known Secondary structure							T	T	T	S	T	T										T		T	T									S	S	S	.	.	.	.	.	.	.	.	.	.										T	S		S	S						.	.	.	.			S									T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.
		388	.	390	.	.	.	.	.															.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.										.	.	.	.	440	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.															.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.															.	.	.	.	.	.	.	.	.
Query Sequence		H	R	D	L	I	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	.	S	N	T	S	S	L	P	I	G	D	I	A	A	H	.	.	.	.	.	.	.	.	.	A	T	R	P	E	Q	V	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.															.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.			.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		G	M	D	L	I	I	V	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	K	I	N	A	G	I	V	K	T	L	C	E	G	I	A	K	C	C	P	R	A	I	V	N	L	I	S	N	.	.	.	.	P	V	N	S	T	V	P	I	A	A	E	V	F	K	K	A	G	T	Y	D	P	K	R	L	L
Template Known Secondary structure		T		S												T	T	S	S			T	T																				T	T	S							S	.	.	.	.																T	T				T	T	S
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		444	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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