Job Description P77399 Confidence 97.53% Date Thu Jan 5 12:28:38 GMT 2012 Rank 302 Aligned Residues 203 % Identity 12% Template c1pixB_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase Resolution 2.20 Å

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		14	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	N	.	I	A	V	I	T	I	D	V	P	G	E	K	M	N	T	L	K	A	E	F	A	S	Q	V	R	A	I	I	K	Q	L	R	E	N	K	E	L	R	G	V	V	F	V	S	A	K	P	D	N	F	I	A	G	A	D	I	N	M	I	G	N	C	K	T	A	Q	E	A	E	A	L	A	R	Q	G	Q	Q
Query Conservation				.
Alig confidence				.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	K	W	C	V	V	V	A	S	D	N	K	K	L	A	G	A	W	V	P	G	Q	A	E	C	L	L	R	A	S	D	T	A	K	T	L	H	V	P	L	V	Y	V	L	N	C	S	G	V	K	.	.	.	.	.	.	.	.	.	.	F	D	E	Q	E	K	V	Y	P	N	R	R	G	G	G	T	P	F	F
Template Known Secondary structure		T	T										T	T	S	G	G	G		B		T	T																T												B		.	.	.	.	.	.	.	.	.	.	G	G	G					S	S	S	T	T	S	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		L	M	A	E	I	H	A	L	P	I	Q	V	I	A	A	I	H	G	A	C	L	G	G	G	L	E	L	A	L	A	C	H	G	R	V	C	T	D	D	P	K	T	V	L	G	L	P	E	V	Q	L	G	L	L	P	G	S	G	.	.	G	T	Q	R	L	P	R	L	I	G	V	S	T	A	L	E	M	I	L	T
Query Conservation																																																												.	.
Alig confidence																																																												.	.												.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		R	N	A	E	L	N	Q	L	G	I	P	V	I	V	G	I	Y	G	T	N	P	A	G	G	G	Y	H	S	I	S	P	T	V	I	I	A	H	E	K	A	N	M	A	V	G	G	A	G	I	M	G	G	M	N	P	K	G	H	V	D	L	E	Y	A	N	E	I	A	D	M	V	.	.	.	.	D	R	T	G	K
Template Known Secondary structure									T	T									S				T								S	S	S						T	T					S	S				T	T	T	T					S															.	.	.	.					S
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure												.	.											.
Query SS confidence												.	.											.
Query Sequence		G	K	Q	L	R	A	K	Q	A	L	.	.	K	L	G	L	V	D	D	V	V	P	.	H	S	I	L	L	E	A	A	V	E	L	A	K	K	E	R	P	S	S	R	P	L	P	V	R	E	R	I	L	A	G	P	L	G	R	A	L	L	F	K
Query Conservation												.	.											.
Alig confidence												.	.											.
Template Conservation
Template Sequence		T	E	P	P	G	A	V	D	I	H	Y	T	E	T	G	F	M	R	E	V	Y	A	S	E	E	G	V	L	E	G	I	K	K	Y	V	G	M	L	P	K	Y	D	P	E	F	F	R	V	D	D	P	K	A	P	A	F	P	A	D	D	L	Y	S
Template Known Secondary structure					S	S	B					T	T	T	S			S	S				S	S															S					G	G	G	G	B	S	S						S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions