Job Description P77399 Confidence 99.41% Date Thu Jan 5 12:28:38 GMT 2012 Rank 139 Aligned Residues 199 % Identity 18% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	.	.	.	.	.	.	.	.	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																					.																						.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	S	I	F	G	L	G	Y	V	G	A	V	C	A	G	C	L	S	.	A	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	T	T
Template Known Secondary structure									S	T	T										.		T	T								S										T	T			S	S			T	T											T	T		.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																					.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.
		382	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.									.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.															.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence				.															.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	F	.	.	.	.	.	.	.	.	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	.	.	.	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S
Query Conservation				.															.	.	.	.	.	.	.	.																						.	.	.
Alig confidence				.															.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		D	F	K	K	A	V	L	D	S	D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G	V
Template Known Secondary structure									T		S										B		T	T	S	S	B																	T	T			S								S				T	T					T										S			B	T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.																		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.					.	490	.	.	.	.	.	.	.				.	.	500	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.										.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.										.	.	.
Query Sequence		P	V	E	K	M	P	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	P	H	A	G	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	T	P	I	V	V	R	.	.	.	.	D	K	A	G	F	Y	V	N	R	.	.	.	I	L	A	P	Y	I	N	E
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.										.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																									.	.	.	.										.	.	.
Template Conservation																																.	.
Template Sequence		D	F	G	V	G	T	N	P	E	F	L	R	E	S	T	A	I	K	D	Y	D	F	P	P	M	T	V	I	G	E	.	.	L	D	K	Q	T	G	D	L	L	E	E	I	Y	R	E	L	D	A	P	I	I	R	K	T	V	E	V	A	E	M	I	K	Y	T	C	N	V	W	H	A	A	K	V	T	F	A	N	E
Template Known Secondary structure		T	B											T	T	S							S		S							.	.	S	S												T	T	S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		506	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	I	R	M	L	T	Q	.	G	E	R	V	E	H	I	D	A	A	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		I	G	N	I	A	K	A	V	G	V	D	G	R	E	V	M	D	V	I
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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