Job Description P77399 Confidence 97.87% Date Thu Jan 5 12:28:38 GMT 2012 Rank 279 Aligned Residues 118 % Identity 19% Template c1mldA_ PDB info PDB header:oxidoreductase(nad(a)-choh(d)) Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases Resolution 1.83 Å

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		309	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure										.																		.	.
Query SS confidence										.																		.	.
Query Sequence		N	S	V	G	I	L	G	G	.	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G
Query Conservation										.																		.	.
Alig confidence										.													.					.	.										.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																							.																.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		A	K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	.	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	.	.	.	.	.	.	.	.	.	.	T	P	G	V	A	A	D	L	S	H	I	E	T	R	A	T	V	K	G	.	.	.	.	Y	L	G	P	E	Q	L	P	D	C
Template Known Secondary structure								T	T	T	S	T	T										.	T		T	T		S							S	S	S	.	.	.	.	.	.	.	.	.	.									T	T	S	S	S	S						.	.	.	.			S	G	G	G
Template Predicted Secondary structure																							.																.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.															.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.										.	.	.	.	440	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																.	.	.	.	.	.	.	.	.
Query Sequence		F	A	H	R	D	L	I	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	.	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	.	.	.	.	.	.	.	.	.	A	T	R	P	E	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.				.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		L	K	G	C	D	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	D	A	M	I	C	I	I	S	N	.	.	.	.	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N	K
Template Known Secondary structure			T	T		S							S					T	T			G	G	G	G																				T	T	S						S	S	.	.	.	.																T	T				T	T	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		442	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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