Job Description P77399 Confidence 99.36% Date Thu Jan 5 12:28:38 GMT 2012 Rank 142 Aligned Residues 191 % Identity 12% Template c1m67A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	.	R	G	F
Query Conservation																																																																														.
Alig confidence																							.																							.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																							.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	K	A	V	V	F	G	S	G	A	F	G	T	A	L	A	M	V	L	S	.	K	K	C	R	E	V	C	V	W	H	M	N	E	E	E	V	R	L	V	N	E	K	.	.	.	.	.	.	.	.	.	.	R	E	N	V	L	F	L	K	G	V	Q	L	A	S	N	I	T	F	T	S	D	V	E	K	A	Y
Template Known Secondary structure											S												.	T	T									S												.	.	.	.	.	.	.	.	.	.	T	S		T	T	T	S	T	T					T	T					S
Template Predicted Secondary structure																							.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.						.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		A	H	R	D	L	I	I	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	.	.	.	.	.	A	A	H	T	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	E	Q	V	I	G	L	H	F	F	S	P	V	E	K	M	P	L	V	E	I	I	P
Query Conservation																														.	.	.	.	.
Alig confidence													.	.																.	.	.	.	.
Template Conservation													.	.
Template Sequence		N	G	A	E	I	I	L	F	V	I	P	.	.	T	Q	F	L	R	G	F	F	E	K	S	G	G	N	L	I	A	Y	A	K	E	K	Q	V	P	V	L	V	C	T	K	G	I	E	R	S	T	L	K	F	P	A	E	I	I	G	E	F	L	P	S	P	L	L	S	V	L	A	G	P	S	F	A	I	E	V	A
Template Known Secondary structure		T	T		S	S							.	.																							T									S			T	T	T									T	T	T	S		G	G	G						S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		462	.	.									.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																			.	.
Query SS confidence					.	.	.	.	.	.	.	.																			.	.
Query Sequence		H	A	G	.	.	.	.	.	.	.	.	T	S	A	Q	T	I	A	T	T	V	K	L	A	K	K	Q	G	K	.	.	T	P	I	V	V	R	D	K	A	G	F	Y	V	N	R	I	L	A	P	Y	I	N	E	A	I	R	M	L	T
Query Conservation					.	.	.	.	.	.	.	.																			.	.
Alig confidence					.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		T	G	V	F	T	C	V	S	I	A	S	A	D	I	N	V	A	R	R	L	Q	R	I	M	S	T	G	D	R	S	F	V	C	W	A	T	T	D	T	V	G	C	E	V	A	S	A	V	K	N	V	L	A	I	G	S	G	V	A	N
Template Known Secondary structure		T	T										S	S												S		T	T	S	S							S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions