Job Description P77399 Confidence 98.03% Date Thu Jan 5 12:28:38 GMT 2012 Rank 266 Aligned Residues 126 % Identity 19% Template c1llcA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	P	A	P	L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T
Query Conservation																																.	.
Alig confidence																													.			.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	K	D	H	Q	K	V	I	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	V	L	Q	.	G	I	A	Q	E	I	G	I	V	D	I	F	K	D	K	T	K	G	D	A	I	D	L	S	N	A	L	P	F	T	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	I	Y	S	A
Template Known Secondary structure						S						S		T	T														.	T			S	S						S		S											T	T	S		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.			B
Template Predicted Secondary structure																													.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.															.	.	.	.	.	80
		382	.	.	.	.	.	.	.	390	.	.	.	.	.															.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																				.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																				.
Query Sequence		D	Y	R	G	F	A	H	R	D	L	I	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	.	.	I	F	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	R	P	E	Q	V	I	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																				.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.				.	.																				.
Template Conservation																																																	.
Template Sequence		E	Y	S	D	A	K	D	A	D	L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	K	I	L	K	S	I	V	D	P	I	V	D	S	G	.	F	N	L	I	F	L	V	A	A	N	P	V	D	I	L	T	Y	A	T	W	K	L	S	G	F	P	K	N	R	V	V	G
Template Known Secondary structure		T	T	T	T	T	S	S		S					B	T				S	S		S	S	S		S	T					T	T	S	T	T	T	T	T	T						T	T	.			S					B		S	S																T	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		445
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions