Job Description P77399 Confidence 98.87% Date Thu Jan 5 12:28:38 GMT 2012 Rank 193 Aligned Residues 121 % Identity 20% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	.	.	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F
Query Conservation																											.	.
Alig confidence																								.			.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	V	V	I	G	A	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	.	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	Y	D	D	C
Template Known Secondary structure		S								S												T	T	.	T			S							S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T								G	G	G
Template Predicted Secondary structure																								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		387	.	.	390	.	.	.							.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																													.																			.
Query SS confidence									.	.	.	.	.	.																													.																			.
Query Sequence		A	H	R	D	L	I	I	.	.	.	.	.	.	E	A	V	F	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	.	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	R	P	.	E	Q	V	I	G	L
Query Conservation									.	.	.	.	.	.																													.																			.
Alig confidence									.	.	.	.	.	.																													.																			.
Template Conservation
Template Sequence		R	D	A	D	L	V	V	I	C	A	G	A	N	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T	N	P	V	D	I	L	T	Y	A	T	W	K	F	S	G	L	P	H	E	R	V	I	G	S
Template Known Secondary structure		S	S		S																													T	T			S							S	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions