Job Description P77399 Confidence 97.02% Date Thu Jan 5 12:28:38 GMT 2012 Rank 339 Aligned Residues 122 % Identity 12% Template c1l7eC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh Resolution 1.90 Å

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		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	A	L	R	S	I	F	F	A	S	T	D	V	K	K	D	P	G	S	D	A	P	P	A	P	L	N	S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R
Query Conservation
Alig confidence																																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	A	V	I	D	G	A	Y	E	F	A	R	A	F	P	M	M	M	T	A	A	G	T	V	P	P	A	R	V	L	V	F	G	V	G	V	A	G	L	Q	A	I	A	T	A	K	.	R	L	G	A	V	V	M	A	T	D	V	R	A	A	T	K	E	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S		S	S					S	S														S												.		T	T								S	S	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.		.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																								.																.
Query SS confidence																								.																.
Query Sequence		R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	.	R	G	F	A	H	R	D	L	I	I	E	A	V	F	E	.	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	A	S	N	T	S	S
Query Conservation																								.																.
Alig confidence		.	.	.	.	.	.	.	.															.																.																								.
Template Conservation		.	.	.	.	.	.	.	.																																																							.
Template Sequence		.	.	.	.	.	.	.	.	E	S	L	G	G	K	F	I	K	Q	A	E	A	V	L	K	E	L	V	K	T	D	I	A	I	T	T	A	L	I	P	G	K	P	A	P	V	L	I	T	E	E	M	V	T	K	M	K	P	G	S	V	I	I	.	D	L	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	T	T															T	T		S									T	T	S						S							T	S		T	T					.		T	T	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																							.
Template SS confidence
										1012	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions