Job Description P77399 Confidence 99.02% Date Thu Jan 5 12:28:38 GMT 2012 Rank 172 Aligned Residues 123 % Identity 20% Template c1gv1D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases Resolution 2.5 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		S	V	G	I	L	G	G	G	L	M	G	G	G	I	A	Y	V	T	A	C	K	A	G	.	.	I	P	V	R	I	K	D	I	N	P	Q	G	I	N	H	A	L	K	Y	S	W	D	Q	L	E	G	K	V	R	R	R	H	L	K	A	S	E	R	D	K	Q	L	A	L	I	S	G	T	T	D	Y	R	G	F	A
Query Conservation																									.	.
Alig confidence																							.		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	V	I	G	A	G	N	V	G	A	T	T	A	F	R	I	A	D	K	.	K	L	A	R	E	L	V	L	L	D	V	V	E	G	I	P	Q	G	K	G	L	D	M	Y	E	T	G	P	V	G	L	F	D	T	K	.	.	.	.	.	.	.	.	.	.	.	.	I	T	G	S	N	D	Y	A	D	T	A
Template Known Secondary structure									S													T	.	T			S							S	S	S	S											T	T					T					.	.	.	.	.	.	.	.	.	.	.	.					S		G	G	G	S	T
Template Predicted Secondary structure																							.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.					.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																								.																		.
Query SS confidence												.	.	.	.																								.																		.
Query Sequence		H	R	D	L	I	I	E	A	V	F	.	.	.	.	E	N	L	E	L	K	Q	Q	M	V	A	E	V	E	Q	N	C	A	A	H	T	I	F	.	A	S	N	T	S	S	L	P	I	G	D	I	A	A	H	A	T	.	R	P	E	Q	V	I	G	L
Query Conservation												.	.	.	.																								.																		.
Alig confidence												.	.	.	.																								.																		.
Template Conservation
Template Sequence		D	S	D	I	V	I	I	T	A	G	L	L	L	M	K	N	A	G	I	V	K	E	V	T	D	N	I	M	K	H	S	K	N	P	I	I	I	V	V	S	N	P	L	D	I	M	T	H	V	A	W	V	R	S	G	L	P	K	E	R	V	I	G	M
Template Known Secondary structure		T		S																										T	T		S	S								S	S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions