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Job DescriptionP15288
Confidence99.94%DateThu Jan 5 11:34:45 GMT 2012
Rank51Aligned Residues228
% Identity22%Templated2fvga2
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.01

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  IFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKD
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Template Sequence  YLKELSXXPGVSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGR. . . DSSKKLLVSAHXDEVFVSDYI. . . . . . . .
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S

BTT

GGGSS
TTS


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   2.......10.........20.........30.........40......... 50.........60.........70
 
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Query Sequence  PIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSEEEG
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Template Sequence  . . . . . EKNGRAVGKAF. . . . DDRAGCSVLIDVLESGVSPAYDTYFVFTVQEESAVVVEQLKPTCAIVVETTTAGDNPEL.
Template Known Secondary structure  .....TTS
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S
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STT.
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   155....160..... ....170.........180.........190.........200.........210.........220....
 
   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  EIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTL
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Template Sequence  . . . . . EERKWATHLGDGPAITFYHRG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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SSSS

TTS


S

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   230.........240.........250
 
   255....260.........270.........280.........290.........300.........310.........320.........330....
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Query Sequence  RNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
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   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRET
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Template Conservation  ..................................................................              
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YVIPKEIFQTIVDT
Template Known Secondary structure  ..................................................................S


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   251........260....
 
   415....420.........430.........440.........450.........460.........470.........480.
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Query Sequence  YQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKE
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Template Sequence  AKNN. DIPFQXKRRTY. . . . . . . . . . . . GVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEE
Template Known Secondary structure  T.T







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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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