51 d2fvga2 Probab=99.94   E-value=3.8e-25  Score=171.36  Aligned_columns=228  Identities=22%

Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             99999828898821799999999999988985999578848999546378888877999810341267787765445448
Q batch____        15 IFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKD   94 (485)
Q Consensus        15 ~~~~l~~iPs~s~~e~~~~~~l~~~l~~~G~~v~~d~~gnv~~~~~~~~~~~~~~~i~l~~H~DvVp~~~~~~~~~w~~d   94 (485)
                      +|++|+++|++||+|.++++|+++++++++++|++|+.||++++++|.   +..|+|++.+|||+|+.....        
T Consensus         2 ~l~~l~~~p~~sg~E~~v~~~i~~~l~~~~~~v~~D~~GNvi~~~~g~---~~~~~i~l~aH~D~v~~~~~~--------   70 (237)
T d2fvga2           2 YLKELSXXPGVSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGR---DSSKKLLVSAHXDEVFVSDYI--------   70 (237)
T ss_dssp             CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCS---EEEEEEEEEEECCBCCCCCCE--------
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCC---CCCEEEEECCCCCCCCCCCCC--------
T ss_conf             378865398977878999999999998779879994788589997587---776058863787511111222--------


Q ss_pred             CCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf             70279868989868877764349999999999982889888789999607555631078787424566689973167777
Q batch____        95 PIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSEEEG  174 (485)
Q Consensus        95 Pf~~~~~~g~l~GrG~~~~~d~~~~~~~~l~~l~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~~~~~d~~~~~  174 (485)
                           ..+++++|++.    |+++|+++++++++....++++|.|+|+.+||.|..|++.+.............+.... 
T Consensus        71 -----~~~~~i~~~a~----Dd~~Gva~lle~~~~~~~~~~~i~~v~~~~EE~G~~Ga~~~~~~~~~~~~~~~~~~~~~-  140 (237)
T d2fvga2          71 -----EKNGRAVGKAF----DDRAGCSVLIDVLESGVSPAYDTYFVFTVQEESAVVVEQLKPTCAIVVETTTAGDNPEL-  140 (237)
T ss_dssp             -----EETTEEEESCH----HHHHHHHHHHHHHHTCCCCSEEEEEEEECCCCCHHHHHHHCCSEEEEEEEEEECSCSTT-
T ss_pred             -----CCEEEEECCCC----CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCCHHCCCCCEEECCCCCC-
T ss_conf             -----21038603677----67779999999999613579978999981832232000107210002111011056898-


Q ss_pred             EEEEECCCCCCCCCCCCCEEEEEECEEEEEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             57862366554555656215774120589999998137642445631056889999999987411455301478516762
Q batch____       175 EIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTL  254 (485)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~g~~~~h~~~~~~~~~~~ai~~~~~~~~~l~~~~~~~~~~~~~g~~  254 (485)
                           ..............+....++                                                      
T Consensus       141 -----~~~~~~~~~g~g~~~~~~~~~------------------------------------------------------  161 (237)
T d2fvga2         141 -----EERKWATHLGDGPAITFYHRG------------------------------------------------------  161 (237)
T ss_dssp             -----CCSSSSCCTTSCCEECSCCSS------------------------------------------------------
T ss_pred             -----CCCCCCCCCCCCEEEEEECCC------------------------------------------------------
T ss_conf             -----854331003774068972277------------------------------------------------------


Q ss_pred             CCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf             14780016999981166511389999999999887530136732799864247765555123899999987413431015
Q batch____       255 RNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN  334 (485)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  334 (485)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (237)
T d2fvga2         162 --------------------------------------------------------------------------------  161 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf             55447600367628415864680799996137853258999999999998859589995387883679985899999999
Q batch____       335 SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRET  414 (485)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~i~~~~~~~~~~ie~~~~~~~~~~~~~~~~v~~l~~a  414 (485)
                                                                                        ...+..+...+.+.
T Consensus       162 ------------------------------------------------------------------~~~~~~~~~~~~~~  175 (237)
T d2fvga2         162 ------------------------------------------------------------------YVIPKEIFQTIVDT  175 (237)
T ss_dssp             ------------------------------------------------------------------SCCCHHHHHHHHHH
T ss_pred             ------------------------------------------------------------------CCCCHHHHHHHHHH
T ss_conf             ------------------------------------------------------------------67899999999999


Q ss_pred             HHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             9998189838999527368999999718997999876898867767203799999999999999987
Q batch____       415 YQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKE  481 (485)
Q Consensus       415 ~~~~~g~~~~~~~~~ggtd~~~~~~~~~~i~~i~~Gp~~~~~H~~~E~i~i~~~~~~~~~l~~~i~~  481 (485)
                      +++. +.+.+.....+            |+|+..++.+...+|++.|.++..++..+.+++.++|++
T Consensus       176 a~~~-~i~~~~~~~~~------------Gi~~~~isvp~~~~Ht~~e~~~~~D~~~~~~ll~~~ie~  229 (237)
T d2fvga2         176 AKNN-DIPFQXKRRTY------------GVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEE  229 (237)
T ss_dssp             HHHT-TCCCEECCCCC------------CSCEEEEEEEEEESSTTCEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHC-CCCCEEEEECC------------CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9981-89822433137------------820799804855555701333599999999999999872