Job Description P0A8G6 Confidence 80.05% Date Thu Jan 5 11:07:47 GMT 2012 Rank 122 Aligned Residues 69 % Identity 22% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		A	K	V	L	V	L	Y	Y	S	M	Y	G	H	I	E	T	M	A	R	A	V	A	E	G	A	S	K	V	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	.	.	.	.	.	G	K	T	Q	T	A	P	V	A	T	P	Q	E	L	A	D	Y	D	A	I	I	F	G	T
Query Conservation																																																					.	.	.	.	.
Alig confidence								.	.	.	.	.			.															.																							.	.	.	.	.
Template Conservation								.	.	.	.	.			.															.
Template Sequence		M	K	V	I	I	I	.	.	.	.	.	G	G	.	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	.	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T
Template Known Secondary structure								.	.	.	.	.			.														T	.	T								S												S	S	S					S		T	T	S								T			T	T
Template Predicted Secondary structure								.	.	.	.	.			.															.
Template SS confidence
		1	.	.	.	.	.						.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		77
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		74

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions