 |
Job Description | P0A8G6 | Confidence | 65.37% | Date | Thu Jan 5 11:07:47 GMT 2012 |
Rank | 178 | Aligned Residues | 67 |
% Identity | 9% | Template | c3g0oA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; |
PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium
|
Resolution | 1.80 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | V | L | V | L | Y | Y | S | M | Y | G | H | I | E | T | M | A | R | A | V | A | E | G | A | S | K | V | D | G | A | E | V | V | V | K | R | V | P | E | T | M | P | P | Q | L | F | E | K | A | G | G | K | T | Q | T | A | P | V | A | T | P | Q | E | L | A | D | Y | D | A | I | I | F | G | T | P | T |
Query Conservation |   |
  |
|
|
|
|
|   |   |
|   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . | . | . | . | . | . |
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
F | H | V | G | I | V | . |
. |
. |
. |
. |
. |
G | L | G | S | X | G | X | G | A | A | R | S | C | L | R | A | . |
G | L | S | T | W | G | A | D | L | N | P | Q | A | C | A | N | L | L | A | E | G | A | C | G | A | A | A | S | A | R | E | . |
. |
. |
F | A | G | V | V | D | A | L | V | I | L | V | V | N |
Template Known Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | . |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  | S | S | S | T | T | . | . | . | T | T | T | T |
| S |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|