Job Description P0A8G6 Confidence 28.72% Date Thu Jan 5 11:07:47 GMT 2012 Rank 372 Aligned Residues 47 % Identity 15% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	V	L	V	L	Y	Y	S	M	Y	G	H	I	E	T	M	A	R	A	V	A	E	G	A	S	K	V	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	G	K	T	Q	T	A	P	V	A	T	P	Q	E	L	A	D	Y	D	A	I	I	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	V	I	G	I	T	G	Q	.	.	.	.	.	.	.	.	.	Q	R	Y	V	D	A	I	Q	K	V	.	G	G	F	P	I	A	L	P	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L
Template Known Secondary structure												.	.	.	.	.	.	.	.	.										T	.	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G							T		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.										.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.																		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions