Job Description P0A8G6 Confidence 94.26% Date Thu Jan 5 11:07:47 GMT 2012 Rank 73 Aligned Residues 153 % Identity 20% Template c3a9rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:d-arabinose isomerase; PDBTitle: x-ray structures of bacillus pallidus d-arabinose2 isomerasecomplex with (4r)-2-methylpentane-2,4-diol Resolution 1.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10		.	.										.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure												.			.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence												.			.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		M	A	K	V	L	V	L	Y	Y	S	.	M	Y	.	.	.	.	.	.	.	.	.	G	H	I	E	T	M	A	R	A	V	A	E	G	A	S	K	V	.	.	.	.	.	.	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	G	K	T	Q	T	A	P	V	A	T	P	Q
Query Conservation												.			.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence												.			.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	K	I	G	I	R	P	T	I	D	G	R	R	K	G	V	R	E	S	L	E	E	T	T	M	N	M	A	K	A	V	A	K	L	L	E	E	N	V	F	Y	Y	N	G	Q	P	V	E	C	V	I	A	D	T	C	I	G	G	V	K	E	A	A	E	A	.	.	.	.	.	.	.	.	.	.	A	E	K	F
Template Known Secondary structure										B					T	T	T	T	T	T	T	T																				B		T	T	S		B							S	S		B		S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	D	Y	D	A	I	I	F	G	T	P	T	R	F	G	N	M	S	G	Q	M	R	T	F	L	D	Q	T	G	G	L	W	A	S	G	A	L	Y	G	K	L	A	S	V	F	S	S	T	G	T	G	G	G	Q	E	Q	T	I	T	S	T	W	T	T	L	A	H	H	G	M	V	I	V	P	I	G	Y	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Sequence		A	R	E	G	V	G	V	S	I	T	V	T	P	C	W	C	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	E	T	M	D	M	D	P	H	I	P	K	A	V	W	G	F	N	G	T	E	R	P	G	A	V	Y	L	A	A	V	L	A	G	Y	N	Q	K	G	L	P	A	F	G	.	.	.	.
Template Known Secondary structure					T									S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S										S	S	S																	T						.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.															.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	L	F	D	V	S	Q	V	R	G	G	T	P	Y	G	A	T	T	I	A	G	G	D	G	S	R	Q	P	S	Q	E	E	L	S	I	A	R	Y	Q	G	E	Y	V	A	G	L	A	V	K	L	N	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	G	K	D	V	Q	D	A	G	D	T	N	I	P	.	.	E	D	V	K	E	K	L	I	R	F	A	K	.	A	G	L	A	V	A	M	M	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S				T	T						.	.													.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template SS confidence
																143	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions