Job Description P0A8G6 Confidence 33.49% Date Thu Jan 5 11:07:47 GMT 2012 Rank 335 Aligned Residues 104 % Identity 13% Template c1zq1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.				.	.	.	.	.	.	.	.	.	.														.
Query SS confidence														.				.	.	.	.	.	.	.	.	.	.														.
Query Sequence		M	A	K	V	L	V	L	Y	Y	S	M	Y	.	G	H	I	.	.	.	.	.	.	.	.	.	.	E	T	M	A	R	A	V	A	E	G	A	S	K	.	V	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	G	K	T	Q	T	A	P	V	A	T	P	Q	E	L	A	D
Query Conservation														.				.	.	.	.	.	.	.	.	.	.														.
Alig confidence														.				.	.	.	.	.	.	.	.	.	.														.																																						.	.
Template Conservation																																																																															.	.
Template Sequence		L	P	E	V	T	I	I	G	T	G	G	T	I	A	S	R	I	D	Y	E	T	G	A	V	Y	P	A	F	T	A	E	E	L	A	K	A	L	P	E	I	F	E	V	A	N	V	K	P	K	L	L	F	N	I	F	S	E	D	X	K	P	K	H	W	V	K	I	A	H	E	V	A	K	A	L	N	S	.	.	G
Template Known Secondary structure										S	S									T	T	T	T																G	G	G	G	G	T	S												G	G	G																				.	.	T
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	A	I	I	F	G	T	P	T	R	F	G	N	M	S	G	Q	M	R	T	F	L	D	Q	T	G	G	L	W	A	S	G	A	L	Y	G	K	L	A	S	V	F	S	S	T	G	T	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	G	V	V	V	A	H	G	T	D	T	X	G	Y	T	A	A	A	L	S	F	X	.	.	.	.	.	.	.	.	.	.	.	L	R	N	L	G	K	P	V	V	L	V	G	A	Q	R
Template Known Secondary structure			S								T	T	T												.	.	.	.	.	.	.	.	.	.	.	S	B	T			S								S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.												.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions