Return to main results Retrieve Phyre Job Id

Job DescriptionP32108
Confidence16.24%DateThu Jan 5 11:49:09 GMT 2012
Rank40Aligned Residues37
% Identity8%Templated1slqa_
SCOP infoVP4 membrane interaction domain VP4 membrane interaction domain VP4 membrane interaction domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.......
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  QPERGWGMQSHVASQEKATDPEIAALSDRISRLEHQLA
Query Conservation 

  
                   

  

  

    
Alig confidence 









.


























Template Conservation 



 
   
.
 

  



 
 


 
 


   
 
Template Sequence  NDDYQTPITN. SVTVRQDLERQLGELREEFNALSQEIA
Template Known Secondary structure 







B
.




T
Template Predicted Secondary structure 









.
Template SS confidence 





































   477..480...... ...490.........500.........510...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions