Return to main results Retrieve Phyre Job Id

Job DescriptionP17444
Confidence99.69%DateThu Jan 5 11:36:11 GMT 2012
Rank19Aligned Residues183
% Identity17%Templated1gpea2
SCOP infoFAD-linked reductases, C-terminal domain FAD-linked reductases, C-terminal domain GMC oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   295....300.........310... ......320.........330.........340.........350.........360......
Predicted Secondary structure 








........



































Query SS confidence 


















. . . . . . . .




















































Query Sequence  NLQDHLEMYLQYECKEPVS. . . . . . . . LYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLP
Query Conservation   
  
              ........                                                     
Alig confidence 


















........




















































Template Conservation 




    
                                                                
   
 
Template Sequence  NMQDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLL
Template Known Secondary structure 
BB


GGG
S

GGGSTTS
S
Template Predicted Secondary structure 



































Template SS confidence 















































































   329330.........340.........350.........360.........370.........380.........390.........400........
 
   367..370........ .380.........390.........400...... ...410.........420.........430.........440....
Predicted Secondary structure 











.















.











Query SS confidence 











.



























.





































Query Sequence  VAINYNGSNAVK. EHGFQCHVGSMRSPSRGHVRIKSRDPHQ. HPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYR
Query Conservation              .            
 
 
 
     
  
. 
 
         
             
          
Alig confidence 











.



























.





































Template Conservation         
               
 
 


 
 
 
 

 
  
 





    
           
 
          
Template Sequence  DEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYF
Template Known Secondary structure  S


TTSS



BSSS
GGGT


TTSSTSTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   409410.........420.........430.........440.........450.........460.........470.........480........
 
   445....450.... .....460.........470.......
Predicted Secondary structure 









...











Query SS confidence 









. . .






















Query Sequence  GREISPGVEC. . . QTDEQLDEFVRNHAETAFHPCGT
Query Conservation       
    ...               
  
  

Alig confidence 









...






















Template Conservation    
  

       


     

    
  




Template Sequence  AGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSS
Template Known Secondary structure  SGGGS
TT

S

S

B

Template Predicted Secondary structure 
























Template SS confidence 



































   489490.........500.........510.........520....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions