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Job DescriptionP17444
Confidence100.00%DateThu Jan 5 11:36:11 GMT 2012
Rank1Aligned Residues532
% Identity26%Templatec3fimB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aryl-alcohol oxidase; PDBTitle: crystal structure of aryl-alcohol-oxidase from pleurotus eryingii
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGR
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Template Sequence  DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLG. AEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPR
Template Known Secondary structure 
S

STTTTSTT


SSB

TT
GG.GTSGGGSGGGSSSSTTB


B



GGGTT


B


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   2.......10.........20.........30.........40... ......50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150..
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Query Sequence  GKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKP. . . . . . . . .
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Template Sequence  GRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPG
Template Known Secondary structure  B
BTTGGGGTS

B




T
TTSS


TT



TTTS
GGGS
BSSSBS
S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   153......160.........170...... ...180.........190.........200.........210.........220.........230.
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Query Sequence  GVNPLFEAMIEAGVQAGYPRTDDL. NGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKR
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Template Sequence  FPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTT
Template Known Secondary structure  S

TT
B
S
GGGS




BSTT

TTT
TTSS


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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   232.......240.........250.........260.........270.........280.........290.........300......
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Query Sequence  . . . . . AVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQY
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Template Sequence  NGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLPAAF
Template Known Secondary structure  TT

SSTTS



TT
TT


S
TTTT
SBB



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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   307..310.........320..... ....330.........340.........350.. .......360.........370..
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Query Sequence  ECKEPVSLYPALQWWNQPK. IGAEWLFGGTGVGASNHFEAGGFIRSR. . . . . . . . . . . . . EEFAWPNIQYHFLPVAINYN
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Template Sequence  FVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFHPA
Template Known Secondary structure  S
S
SSGGGGT
S
SGGG

S
S


TT
GGGGTS


SSSTTS
SSS


TT
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   373......380.........390.........400.........410.........420.........430.........440.........450.
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Query Sequence  GSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPG.
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Template Sequence  IPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIRPFDPRL
Template Known Secondary structure  S


SS

SS
S

B
SSS
TTS



TT
STSGGGTTTSSGGG
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   452.......460.........470.........480... . .....490.........500.........510.........520.........
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Query Sequence  VECQTDEQLDEFVRNHAETAFHPCGTCKMGYD. E. MSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIAD
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Template Sequence  RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGAD
Template Known Secondary structure  S
TT


S

B
TT
B

TT
SS
SB
TT
BBTT
BS
SGGG

S

SS
T
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   481........490.........500.........510.........520.........530.........540.........550.........560
 
   530....
Predicted Secondary structure 
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Query Sequence  MIRGQ
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Template Sequence  LIKAD
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   561....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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