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Job DescriptionP17444
Confidence99.19%DateThu Jan 5 11:36:11 GMT 2012
Rank48Aligned Residues198
% Identity13%Templatec3dmeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGR
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Template Sequence  DIDCIVIGAGVVGLAIARALAA. GGHEVLVAEAAEGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Query Sequence  GKGLGGSSLINGMCY. . . . IRGNALDLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPL
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Template Sequence  . . . GTGTSSRNSEVIHAGIYYPADSLKARLCV. . . . . . . . . . RGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSI
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Query Sequence  FEAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGY. . LDQAKSRPNLTIRTHAMTDHIIFDGKRAVGV
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Template Sequence  ARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFEL
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   236...240.........250.........260
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Query Sequence  EWLEGDSTIPTRATANKEVLLCAGA
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Template Sequence  DFGGAEP. . . . MTLSCRVLINAAGL
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   187..190... ......200.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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