Return to main results Retrieve Phyre Job Id

Job DescriptionP17444
Confidence100.00%DateThu Jan 5 11:36:11 GMT 2012
Rank11Aligned Residues504
% Identity14%Templatec2igoG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:pyranose oxidase; PDBTitle: crystal structure of pyranose 2-oxidase h167a mutant with 2-2 fluoro-2-deoxy-d-glucose
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50..
Predicted Secondary structure 






















............................
Query SS confidence 



















































. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   









  
   
 


   
  




 
                 ............................
Alig confidence 






















.



























............................
Template Conservation 
 

 





 

   
  

 . 
  




 
                                             
Template Sequence  IKYDVVIVGSGPIGCTYARELVG. AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVV
Template Known Secondary structure  S

S.TT
SS


STTSTT

TT
SSGGGT
S








Template Predicted Secondary structure 



.

















































Template SS confidence 















































































   45....50.........60....... ..70.........80.........90.........100.........110.........120...
 
   53......60.........70.........80.........90.........100.........110...... ...120.....
Predicted Secondary structure  .....






































..
Query SS confidence  . . . . .































































. .








Query Sequence  . . . . . FPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW. . SYLDCLPYY
Query Conservation  .....                             
  


 
        
    

  
    
   
..    
 
 
Alig confidence  .....
























































....


..








Template Conservation                                        

 
  
                 ....         
    
Template Sequence  DTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVK. . . . DDADADDAEWDRLY
Template Known Secondary structure 

S
TTS


SS

S
TT

TT

TTS

TT


STTGGGGT


B




GGGS

SST....T
Template Predicted Secondary structure 






































....





Template SS confidence 















































































   124.....130.........140.........150.........160.........170.........180..... ....190.........
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  RKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYL
Query Conservation     
                                                                 
 
 
     
Alig confidence 










.............























































Template Conservation     
       .............                                                        
Template Sequence  TKAESYFQTGT. . . . . . . . . . . . . DQFKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRP
Template Known Secondary structure  TS.............
TTTT
TTTT




TT






Template Predicted Secondary structure 





.............








































Template SS confidence 















































































   200.........210 .........220.........230.........240.........250.........260......
 
   206...210.........220....... ..230.........240.........250.........260.........270.........280...
Predicted Secondary structure 







..






















Query SS confidence 





















. .























































Query Sequence  DQAKSRPNLTIRTHAMTDHIIF. . DGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI
Query Conservation    
       
     
  
  ..      

              
   







 
  


 
       
   
 
Alig confidence 





















..






















.































Template Conservation            
 
   
 

           
            
 
.
 







 

 


 



    
   

Template Sequence  NTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKA. DVYVLTAGAVHNTQLLVNSGFGQLGRPNPANP
Template Known Secondary structure  TTS
TTSS
TTT

.
S
TTTSS

SS

TTS
Template Predicted Secondary structure 














.





















Template SS confidence 















































































   267..270.........280.........290.........300.........310... ......320.........330.........340.....
 
   284.....290.........300.........310 .........320.........330.....
Predicted Secondary structure 













............................















Query SS confidence 


























. . . . . . . . . . . . . . . . . . . . . . . . . . . .
























Query Sequence  PLVHELPGVGENLQDHLEMYLQYECKE. . . . . . . . . . . . . . . . . . . . . . . . . . . . PVSLYPALQWWNQPKIGAEWLFGGT
Query Conservation          

  
  
           ............................                         
Alig confidence 
..























............................
























Template Conservation   ..   
 

  
 

                                                                
Template Sequence  P. . ELLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDP
Template Known Secondary structure 
..SS
TTTTBS
B



TTT
S
TTSTT


SS
TT
SS

TT

Template Predicted Secondary structure 
..



























































Template SS confidence 















































































   346 ...350.........360.........370.........380.........390.........400.........410.........420...
 
   336...340.........350.........360.........370.........380.........390.........400.. .......410...
Predicted Secondary structure 














































..






Query SS confidence 


































































. .










Query Sequence  GVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSR. . DPHQHPAILFN
Query Conservation                                                         
 
 
 
     ..
  
 
 
   
Alig confidence 


































































..










Template Conservation                                                                       
          
Template Sequence  LPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFD
Template Known Secondary structure 
SS
TT






BTTB







TTGGGS
GGG




TT

TTSS
Template Predicted Secondary structure 


























































Template SS confidence 















































































   424.....430.........440.........450.........460.........470.........480.........490.........500...
 
   414.....420 .........430.........440.........450.........460.........470.........480.... .. ...
Predicted Secondary structure 



.

































.

..


Query SS confidence 






.































































.

. .


Query Sequence  YMSHEQD. WQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDE. MS. . VVD
Query Conservation        
.             
               
                   
  
  

  

 
 . 
..


Alig confidence 






.




























................


















.

..


Template Conservation                                       ................       
  


 

  
     


Template Sequence  FRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLPQF. . . . . . . . . . . . . . . . MEPGLVLHLGGTHRMGFDEKEDNCCVN
Template Known Secondary structure 



TTTTT
TTS
S................

TTTT


B
TT
B
S
TTTTT
SB
Template Predicted Secondary structure 












................





















Template SS confidence 















































































   504.....510.........520.........530.........540 .........550.........560.......
 
   490.........500.........510.........520.........530.........540.
Predicted Secondary structure 


























Query SS confidence 



















































Query Sequence  GEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRST
Query Conservation     

 
  



 
 

 
     





 


 
 

 
          
Alig confidence 



















































Template Conservation      
 

 

 
 



 
     

 


 


 


  
          
Template Sequence  TDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT
Template Known Secondary structure  TT
BBTT
SS
SGGG

S


S








Template Predicted Secondary structure 

























Template SS confidence 



















































   568.570.........580.........590.........600.........610.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions