Job Description P17444 Confidence 100.00% Date Thu Jan 5 11:36:11 GMT 2012 Rank 4 Aligned Residues 530 % Identity 26% Template c1gpeA_ PDB info PDB header:oxidoreductase(flavoprotein) Chain: A: PDB Molecule:protein (glucose oxidase); PDBTitle: glucose oxidase from penicillium amagasakiense Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	D	Y	I	I	I	G	A	G	S	A	G	N	V	L	A	T	R	L	T	E	D	P	N	T	S	V	L	L	L	E	A	G	G	P	D	Y	R	F	D	F	R	T	Q	M	P	A	A	L	A	F	P	L	Q	G	K	R	Y	N	W	A	Y	E	T	E	P	E	P	F	M	N	N	R	R	M	E	C	G	R
Query Conservation
Alig confidence																																																				.																		.	.
Template Conservation																																																				.																		.	.
Template Sequence		T	Y	D	Y	I	I	A	G	G	G	L	T	G	L	T	V	A	A	K	L	T	E	N	P	K	I	K	V	L	V	I	E	K	G	F	Y	E	S	N	D	G	A	I	I	E	D	P	N	A	Y	.	G	Q	I	F	G	T	T	V	D	Q	N	Y	L	T	V	P	L	.	.	I	N	N	R	T	N	N	I	K	A
Template Known Secondary structure											S												T	S	T	T								S	S				T	T	S							G	G	G	T	.	T	T	T	T	T	S	T	T	B									.	.	T	T	S
Template Predicted Secondary structure																																																				.																		.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	G	L	G	G	S	S	L	I	N	G	M	C	Y	I	R	G	N	A	L	D	L	D	N	W	A	Q	E	P	G	L	E	N	W	S	Y	L	D	C	L	P	Y	Y	R	K	A	E	T	R	D	M	G	E	N	.	.	.	.	.	.	.	.	.	.	.	D	Y	H	G	G	D	G	P	V	S	V	T	T	S
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	G	L	G	G	S	T	L	I	N	G	D	S	W	T	R	P	D	K	V	Q	I	D	S	W	E	K	V	F	G	M	E	G	W	N	W	D	N	M	F	E	Y	M	K	K	A	E	A	A	R	T	P	T	A	A	Q	L	A	A	G	H	S	F	N	A	T	C	H	G	T	N	G	T	V	Q	S	G	A	R
Template Known Secondary structure		B		S	T	T	G	G	G	G	T	S																		T	T			T	T		S											T														T					G	G	G			B	S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		151	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		K	P	.	.	G	V	N	P	L	F	E	A	M	I	E	A	G	V	Q	A	G	Y	P	R	T	D	D	L	N	G	Y	Q	Q	E	G	F	G	P	M	D	R	T	V	T	P	Q	G	R	R	A	S	T	A	R	G	Y	L	D	Q	A	K	S	R	P	N	L	T	I	R	T	H	A	M	T	D	H	I	I	F	D
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		D	N	G	Q	P	W	S	P	I	M	K	A	L	M	N	T	V	S	A	L	G	V	P	V	Q	Q	D	F	L	C	G	H	P	R	G	V	S	M	I	M	N	N	L	D	E	N	Q	V	R	V	D	A	A	R	A	W	L	L	P	N	Y	Q	R	S	N	L	E	I	L	T	G	Q	M	V	G	K	V	L	F	K
Template Known Secondary structure				S	S		B		T												T	T			B	S			T	T	S	S											S	B		T	T			B								T	T	T	T	T	T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		229	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		G	K	.	.	.	.	R	A	V	G	V	E	W	L	E	G	D	S	T	I	P	T	R	A	T	A	N	K	E	V	L	L	C	A	G	A	I	A	S	P	Q	I	L	Q	R	S	G	V	G	N	A	E	L	L	A	E	F	D	I	P	L	V	H	E	L	P	G	V	G	E	N	L	Q	D	H	L	E	M	Y	L
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.													.																																																.
Template Conservation																				.																																																.
Template Sequence		Q	T	A	S	G	P	Q	A	V	G	V	N	F	G	T	N	K	A	.	V	N	F	D	V	F	A	K	H	E	V	L	L	A	A	G	S	A	I	S	P	L	I	L	E	Y	S	G	I	G	L	K	S	V	L	D	Q	A	N	V	T	Q	L	L	D	L	P	.	V	G	I	N	M	Q	D	Q	T	T	T	T	V
Template Known Secondary structure				T	T													T	T	.															S		T	T	T								T	T										T	T				S					.	T	T		S	B	B
Template Predicted Secondary structure																				.																																																.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.										.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	E	C	K	E	P	V	S	L	Y	P	A	L	Q	W	W	N	Q	P	K	I	.	.	.	.	.	.	.	.	.	G	A	E	W	L	F	G	G	T	G	V	G	A	S	N	H	F	E	A	G	G	F	I	R	S	R	E	E	F	A	W	P	N	I	Q	Y	H	F	L	P	V	A	I	N	Y	N	G	S	N
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	R	A	S	S	A	G	A	G	Q	G	Q	A	V	F	F	A	N	F	T	E	T	F	G	D	Y	A	P	Q	A	R	D	L	L	N	T	K	L	D	Q	W	A	E	E	T	V	A	R	G	G	F	H	N	V	T	A	L	K	V	Q	Y	E	N	Y	R	N	W	L	L	D	E	D	V	A	F	A	E	L	F
Template Known Secondary structure							G	G	G		S	B														G	G	G											S											T	T	S		S																			S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																					.																																												.
Query SS confidence																																					.																																												.
Query Sequence		A	V	K	E	H	G	F	Q	C	H	V	G	S	M	R	S	P	S	R	G	H	V	R	I	K	S	R	D	P	H	Q	H	P	A	I	.	L	F	N	Y	M	S	H	E	Q	D	W	Q	E	F	R	D	A	I	R	I	T	R	E	I	M	H	Q	P	A	L	D	Q	Y	R	G	R	E	I	S	P	G	V	E	.
Query Conservation																																					.																																												.
Alig confidence																																					.																																												.
Template Conservation
Template Sequence		M	D	T	E	G	K	I	N	F	D	L	W	D	L	I	P	F	T	R	G	S	V	H	I	L	S	S	D	P	Y	L	W	Q	F	A	N	D	P	K	F	F	L	N	E	F	D	L	L	G	Q	A	A	A	S	K	L	A	R	D	L	T	S	Q	G	A	M	K	E	Y	F	A	G	E	T	L	P	G	Y	N	L
Template Known Secondary structure					T	T									S	S					B					S	S	S		G	G	G	T								T	T	S	S																			T	S	T	T											S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
				454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure		.	.																																.
Query SS confidence		.	.																																.
Query Sequence		.	.	C	Q	T	D	E	Q	L	D	E	F	V	R	N	H	A	E	T	A	F	H	P	C	G	T	C	K	M	G	Y	D	E	.	M	S	V	V	D	G	E	G	R	V	H	G	L	E	G	L	R	V	V	D	A	S	I	M	P	Q	I	I	T	G	N	L	N	A	T	T	I	M	I	G	E	K	I	A	D	M
Query Conservation		.	.																																.
Alig confidence		.	.																																.
Template Conservation
Template Sequence		V	Q	N	A	T	L	S	Q	W	S	D	Y	V	L	Q	N	F	R	P	N	W	H	A	V	S	S	C	S	M	M	S	R	E	L	G	G	V	V	D	A	T	A	K	V	Y	G	T	Q	G	L	R	V	I	D	G	S	I	P	P	T	Q	V	S	S	H	V	M	T	I	F	Y	G	M	A	L	K	V	A	D	A
Template Known Secondary structure			T	T													S					S			B		T	T		B	S		G	G	G	T		S	B		T	T		B	B	T	T		B	S					S	T	T			S	S			S	S		S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		531	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	Q	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	D	D	Y	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.