 |
Job Description | P0AB65 | Confidence | 4.46% | Date | Thu Jan 5 11:14:44 GMT 2012 |
Rank | 80 | Aligned Residues | 31 |
% Identity | 26% | Template | c4a1aH_ |
PDB info |
PDB header:ribosome | Chain: H: PDB Molecule:60s ribosomal protein l10; |
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.
|
Resolution | 3.52 Å |
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | Y | A | K | N | L | D | D | G | S | V | E | V | V | A | C | G | E | E | G | Q | V | E | K | L | M | Q | W | L | K |
Query Conservation |   |
  |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
Template Sequence |   |
L | G | K | A | A | R | V | D | I | G | S | I | L | F | S | V | R | V | K | E | P | H | V | K | Y | A | I | D | A | L | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|