 |
Job Description | P0AB65 | Confidence | 6.63% | Date | Thu Jan 5 11:14:44 GMT 2012 |
Rank | 58 | Aligned Residues | 38 |
% Identity | 3% | Template | c3c9gB_ |
PDB info |
PDB header:nucleotide binding protein | Chain: B: PDB Molecule:upf0200/upf0201 protein af_1395; |
PDBTitle: crystal structure of uncharacterized upf0201 protein af_135
|
Resolution | 2.30 Å |
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | E | A | K | R | L | G | L | T | G | Y | A | K | N | L | D | D | G | S | V | E | V | V | A | C | G | E | E | G | Q | V | E | K | L | M | Q | W | L |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|   |
|   |
|   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
K | Q | T | A | T | V | S | R | I | N | F | C | D | E | N | A | V | S | P | I | K | V | T | F | R | L | N | N | I | P | F | S | R | F | L | D | Y | I |
Template Known Secondary structure |   |
T | T | G | G | G | G | T |
|
|
| B |
|
| T | T |
|
|
|
|  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|