Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB65
Confidence6.40%DateThu Jan 5 11:14:44 GMT 2012
Rank60Aligned Residues32
% Identity16%Templatec2zkrh_
PDB info PDB header:ribosomal protein/rnaChain: H: PDB Molecule:rna expansion segment es12; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution8.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60...
Predicted Secondary structure 







Query SS confidence 































Query Sequence  LTGYAKNLDDGSVEVVACGEEGQVEKLMQWLK
Query Conservation 
 
 
 
  

 


  

    
  
   
 
Alig confidence 































Template Conservation 
   




 
 




         





Template Sequence  PQGTVAKVHIGQVIMSIRTKLQNKEHVIEALR
Template Known Secondary structure 
TT

STT
Template Predicted Secondary structure 









Template SS confidence 































   121........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions