Job Description P0AB65 Confidence 21.80% Date Thu Jan 5 11:14:44 GMT 2012 Rank 35 Aligned Residues 55 % Identity 11% Template c2zkre_ PDB info PDB header:ribosomal protein/rna Chain: E: PDB Molecule:rna expansion segment es7 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		R	V	Q	G	V	G	F	R	Y	T	T	Q	Y	E	A	K	R	L	G	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	N	L	D	D	G	S	V	E	V	V	A	C	G	.	E	E	G	Q	V	E	K	L	M	Q	W	L	K	S	G	G	P
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		R	S	V	Y	A	H	F	P	I	N	V	V	I	Q	E	N	G	S	L	V	E	I	R	N	F	L	G	E	K	Y	I	R	R	V	R	M	R	P	G	V	A	C	S	V	S	Q	A	Q	K	D	E	L	I	L	E	G	N	D	I	E	L	V	S	N	S	A	A	L	I	Q	Q	A	T	T
Template Known Secondary structure						S	S	S								T	T		S						S	G	G	G		S	S								S	S							S	S		S	S							S																T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions