Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB65
Confidence85.85%DateThu Jan 5 11:14:44 GMT 2012
Rank16Aligned Residues64
% Identity14%Templatec2xznF_
PDB info PDB header:ribosomeChain: F: PDB Molecule:eif1; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50. ........60.........70..
Predicted Secondary structure 













.




Query SS confidence 










































.




















Query Sequence  WVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGE. EGQVEKLMQWLKSGGPRSARV
Query Conservation   
 
 






  
   
   

 
 
 
  

 


  

 .   
  
   
    
  
 
Alig confidence 










































.




















Template Conservation   
 

    


 


 


  





         
 



    
   
   
      
 
Template Sequence  TVEGIPPEFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEEGIAAVDNITI
Template Known Secondary structure 


TTS
TTS



STT
S

SSS
TTT
Template Predicted Secondary structure 





















Template SS confidence 
































































   34.....40.........50.........60.........70.........80.........90........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions