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Job DescriptionP76149
Confidence100.00%DateThu Jan 5 12:19:43 GMT 2012
Rank12Aligned Residues455
% Identity33%Templatec3r31A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  THAISINPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPINQA
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Template Sequence  TPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET
Template Known Secondary structure 

TTT




S
T


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   30.........40.........50.........60.........70.........80.........90.........100.........
 
   87..90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  . RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNV
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Template Sequence  IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT
Template Known Secondary structure  ST



SSS
S

SSSTT


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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  MGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN
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Template Sequence  PLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFD
Template Known Secondary structure 
STT

TTS



TTT
TTS
TT





T
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   190.........200.........210.........220.........230.........240.........250.........260.........
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  DADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEK
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Template Conservation   

   
   
        

 
 
   
 
     
     
      
  
 
 
     
 
            
  
Template Sequence  DADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEK
Template Known Secondary structure  TS
TS

TT
GGG

B

TTSTT
SB

BS
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   270.........280.........290.........300.........310.........320.........330.........340.........
 
   326...330.........340... ......350.........360.........370.........380.........390.........400..
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Query Sequence  TLAQGARLLLGGEKMAGA. . . GNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDE
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Template Sequence  GKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADL
Template Known Secondary structure  T


S

SS

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TTSS

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S
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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   403......410.........420.........430.........440.........450.........460.
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Query Sequence  TQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR
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Template Sequence  ARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST
Template Known Secondary structure  S

SSS




TTS
B

TT

BSTGGGGGGS

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   430.........440.........450.........460.........470.........480........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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